Sustained scientific work requires a knowledge substrate that carries interpretation across tasks and preserves paths to source evidence. We call this process \emph{scientific knowledge compilation} and implement it in ASKS, the \emph{Agent-Driven Scientific Knowledge System}. For each source, an LLM produces a readable Wiki view and machine-facing semantics. Deterministic checks convert the latter into a document-local GraphDelta, and embedding geometry together with explicit graph rules integrates the proposed changes into persistent state. Each ingest is an inspectable state transition over accumulated knowledge, with compiled Wiki and graph views linked to the preserved source record. We examine this process by chronologically compiling 56 published papers from one research program. Branch survival, cross-paper support, lineage, coverage, and churn yield a source-traceable author research portrait centered on tensor-network methods, with branches into quantum many-body research, tensor-network machine learning, and quantum-AI-oriented directions. In this run, higher-level Hub organization remains stable and low-churn. Canonical-node growth is predominantly additive. Graph-level measurements and navigation paths retain links to the source records from which they were compiled.
Conversational analytics systems assume the user already has a well-formed question, leaving a non-expert facing a blank query box on an unfamiliar enterprise schema. Commercial 'proactive' tools narrow this gap only by detecting statistical anomalies over analyst-curated metric layers, and academic next-question recommenders depend on query logs that a fresh dataset lacks. We describe a production analytics system that inverts the interaction model from question-first to analyst-first through two coupled architectural ideas. First, a pluggable domain-expert 'skill' abstraction: a folder-based, database-free subject-matter pack (a manifest, per-stage prompt facets, keyword-routed references, report templates, and optional compute) auto-selected per (client, dataset) by deterministic schema matching and spliced as a cross-cutting concern into every stage of an agentic pipeline, the schema explorer, and the report engines, degrading to a strict no-op when absent. Because a skill is a self-contained folder resolved deterministically, the catalogue is open-ended: an extensible marketplace of domain experts. Second, an offline knowledge-compilation loop: an agent probes the dataset's parquet via DuckDB (zero load on production), runs critic-gated per-table convergence with self-healing retries, and data-validates joins by value overlap, producing durable schema knowledge that drives standing expert reports whose every published metric is re-verified by re-executing its evidence SQL, plus suggested questions that mirror the report agenda. These close a proactive loop: reports surface numbers, the numbers seed questions, and a click launches a verified deep dive, all before the query box is used. We give a formal model and report illustrative single-tenant evidence. We make no user-study or benchmark claims; the contribution is the architecture and its defensibility.
Retrieval-augmented generation (RAG) enables agents to access external knowledge at inference time, but it primarily retrieves fragmented declarative evidence, leaving agents to repeatedly infer task procedures from passages, manuals, examples, logs, or trajectories. This raises a fundamental question: can skills extracted from external knowledge bases be installed into an agent, enabling it to rapidly approximate domain expertise? In this paper, we propose Anything2Skill, a taxonomy-guided framework that compiles heterogeneous external knowledge into reusable, retrievable, and executable skills for agents. Given a corpus of knowledge records, \textsc{Anything2Skill} first decomposes each record into evidence windows and performs plan-and-expand skill extraction under a skill-tree prior. The extracted candidates are then converted into structured skill contracts that specify invocation conditions, contraindications, action moves, workflow steps, constraints, output specifications, supporting evidence, and confidence scores. To construct a deployable procedural memory, Anything2Skill manages the extracted skills in a persistent SkillBank through taxonomy-aware compilation, registry-level reconciliation, lifecycle tracking, versioned updates, and visible skill-tree projection. At inference time, agents retrieve both task-specific passages from the original knowledge base and relevant procedural skills from the SkillBank, allowing RAG to provide declarative evidence while compiled skills provide reusable procedural guidance. Experiments on qsv and GitHub-CLI show that Anything2Skill combined with RAG achieves 98.85\% and 94.10\% success rates, respectively, substantially outperforming RAG-only agents. These results suggest that compiling latent procedural knowledge into explicit skills is an effective way to extend retrieval-augmented agents from knowledge access toward capability reuse.