Reliable decision-support in digital agriculture requires accurate predictions and well-calibrated uncertainty estimates, particularly for dense prediction tasks such as semantic segmentation. Ensemble methods provide strong uncertainty quantification, but their computational and memory demands limit practical use, while single-model approximations often trade off uncertainty quality for efficiency. We propose ST-LoRA, a parameter-efficient ensemble framework that builds diverse ensemble members from a single training trajectory by combining Low-Rank Adaptation (LoRA) with snapshot ensembling. Each member shares a frozen pretrained backbone and differs only in lightweight low-rank adapters, reducing trainable parameters to under 10% of the full model while preserving ensemble diversity. We evaluate across two agricultural datasets - GrowliFlower-L (cauliflower, open field) and BUP20 (sweet pepper, glasshouse) - using SegFormer and Mask2Former, covering in-distribution performance, calibration under distribution shift, and out-of-distribution detection. Ablations show feed-forward layers, not attention layers, are the critical LoRA target for dense prediction, contrary to the attention-only convention from language models. ST-LoRA matches or exceeds full-rank ensembles in segmentation accuracy and calibration across both datasets and architectures, while substantially reducing training time, inference latency, memory footprint, and storage requirements. Against efficient baselines - Snapshot Ensemble, MC Dropout, and Deep Deterministic Uncertainty - ST-LoRA consistently matches or outperforms them in image/pixel-level OoD detection, calibration stability under shift, and cross-seed variance, with far fewer parameters and lower compute. These results show LoRA-efficient ensemble adaptation is a highly effective, practical approach for uncertainty-aware agricultural vision systems.
Semantic segmentation in agricultural imagery is often evaluated under in-domain protocols, yet practical deployment requires robustness to appearance perturbations, limited annotations, and cross domain shift. This paper presents a diffusion-guided hybrid segmentation framework in which U-Net, DeepLabV3+, and SegFormer backbones generate coarse masks that are refined by Denoising Diffusion Probabilistic Models (DDPM), latent diffusion, or semantic-guided diffusion. The framework is evaluated through a 3x3 architectural screening study on PlantSegV3, followed by boundary-constrained optimization, perturbation-guided retraining, low-data evaluation, constrained hyperparameter screening, and controlled cross-domain adaptation. On PlantSegV3, the best selected hybrid model achieves 71.83% refined mean Intersection-over-Union (mIoU) and 26.10% refined Boundary-F1, and the selected models remain stable under substantially reduced supervision, demonstrating strong annotation efficiency. Perturbation analysis identifies grayscale conversion, fog, coarse dropout, and shadow as the most disruptive appearance shifts, and the resulting augmentation policy substantially improves robustness during retraining. The adapted models further show effective transfer to external agricultural datasets under limited target supervision, indicating that diffusion refinement and boundary-aware optimization provide transferable structural priors. Overall, the results show that carefully matched backbone-refiner pairings, combined with perturbation-aware retraining, can improve structural delineation and robustness under realistic resource and distribution constraints.