ReCowGnition: A Realistic Biometric Benchmark for Cow Face Recognition

With the development of precision livestock farming and the advances in computer vision, visual animal biometrics has gained attention. Using biometric technologies that have been proven effective for humans to identify livestock can increase animal welfare as well as production efficiency. However, challenges such as complex scenarios, similar appearances, occlusions, and non-cooperative behavior, as well as the limited amount of publicly available labeled datasets, remain. In this work, we contribute a novel, publicly available cow face benchmark dataset that has been collected in a realistic automatic scenario with 6,838 images of 161 different cows at a dairy farm. In addition to the public dataset, we define two verification and four identification evaluation protocols to foster comparable research in the cow recognition research field. Further, we provide evaluation results on our dataset of six benchmark models, which include models trained on limited data, cross-species fine-tuned models, and zero-shot foundation model approaches.

Exploring Clustering Capability of Inpainting Model Embeddings for Pattern-based Individual Identification

In this paper, we explore deep learning techniques for individual identification of animals based on their skin patterns. Individual identification is crucial in biodiversity monitoring, since it enables analysis of decline or growth of populations, or intra-species interactions within populations. Models trained for the task of individual identification often do not focus on the skin pattern of animals, but on background details or body shape details. These characteristics are not individually specific, or can change drastically through time. We focus on techniques that will make machine learning models more responsive to skin pattern structure when extracting individual visual embeddings from images. For this, we explore image inpainting of task-specific masks as an auxiliary task to enhance ML-based individual identification from animal skin patterns. We propose a comparative analysis among four models as an encoder backbone for the individual identification task. We focus on the case study of zebrafish, which is a widely recognized biological model organism, and which exhibits individually identifying skin patterns. To evaluate encoder backbone performance, we present standard metrics for classification accuracy, embedding clustering metrics, and GradCAM visualizations.