Camera trap classification with deep learning under ground truth uncertainty

Supervised deep learning methods enable the rapid processing of ecological image data, but depend on a costly annotation process. Consequently, training labels are commonly derived from volunteer citizen science projects. However, disagreement among volunteers introduces uncertainty in the "ground truth" data that are assumed to be correct for model training and validation. Using two datasets containing camera trap images with associated volunteer and expert classifications, we investigated the effects of training under higher ground truth uncertainty. We observed improved overall test accuracy, particularly for images that were more difficult for volunteers. Species-level accuracy also generally improved, but generalisation to a different dataset did not. The benefits of ground truth uncertainty were enhanced by pre-training on ImageNet. Pre-training also reduced the number of training epochs required; further reductions in computational cost, but not gains in accuracy, resulted from additional pre-training on other camera trap images. With unbalanced training data, we still observed a clear benefit of increased ground truth uncertainty for overall accuracy, especially on difficult images. Class imbalance improved accuracy for common species, reduced rare species accuracy, and changed patterns of misclassification to more closely resemble mistakes made by volunteers. Our findings have implications for applying deep learning across ecological image types with multiple labels. Practitioners can improve accuracy, especially on difficult examples, by including moderate levels of label disagreement during training and using models pre-trained on general image data. In addition to improving the use of citizen science-derived labels in model training, our study suggests avenues for more effectively integrating human and deep learning classifications in combined workflows. (abridged)

Deep learning-based hierarchical insect classification using camera trap imagery

Declining insect populations make reliable biodiversity monitoring increasingly urgent, yet monitoring of insect biodiversity is hampered by a lack of standardised data and by costly and time-consuming manual identification by expert entomologists. Deep learning-based image classifiers, processing data from automated non-lethal camera traps, have the potential to transform and scale insect biodiversity monitoring. However, challenges remain in acquiring expert-annotated datasets, developing model architectures that generalise well across diverse taxonomic levels and training models on highly imbalanced data. Hierarchical data also benefits from designing models that default to higher-confidence, coarser-level predictions, when uncertain about finer taxonomic levels. In this paper we address these challenges with a deep learning-based hierarchical classification model. First, we present a manually curated, long-tailed dataset of around one million images of insects, extracted from 1,801 camera-trap video recordings and annotated with a five-level, 34-class hierarchy. Further, we adapt a hierarchical classification model architecture to a five-level variable-depth hierarchy, with class-balanced weighting. Our model improves on non-hierarchical classifiers by leveraging biological taxonomy to extract granularity-specific visual features and makes hierarchy-consistent predictions to the deepest taxonomic level that meets a confidence threshold (T = 0.6). Our model achieved a per-level accuracy of 80-99% on test data, across five levels of hierarchy. Furthermore ...

The PanAf-SBR Dataset: Social Behaviour Recognition for Wild Great Apes

Behavioural shifts in wild great ape populations, particularly the breakdown of social structures, can serve as an early indicator of population decline. Automating the detection of behaviours indicative of these shifts is therefore a critical task for conservation. Several valuable datasets have recently been introduced for the automated recognition of great ape behaviour, yet few include fine-grained social behaviour annotations, and those that do are captured either in captive settings or via aerial platforms such as UAVs. We address this gap by introducing PanAf-SBR, the first wild great ape camera trap dataset annotated with social behaviours. PanAf-SBR extends PanAf500 with 100 additional videos covering 36,063 frames. These come with 81,096 annotations including bounding boxes, segmentation masks, intra-video identities, and seven social behaviour classes defined under the action giver and receiver convention of ChimpACT. We use this data together with the AlphaChimp architecture to establish the first benchmarks for fine-grained social behaviour recognition in wild great apes from camera trap footage. We further conduct bidirectional transfer learning experiments between PanAf-SBR and the captive ChimpACT dataset, finding that cross-dataset pre-training is highly beneficial for specific classes rather than of uniform benefit. Finally, we examine the role of background context by inverting the segmentation masks to suppress non-ape pixels.

Spotted: Location-informed Reidentification of Hyenas and Leopards in Camera Trap Surveys

Animal re-identification (ReID) in camera-trap surveys remains challenging due to low image quality, strong variation in illumination and viewpoint, and highly imbalanced numbers of observations per individual. As a result, current ReID performance is often insufficient for fully automated use, and practical workflows typically depend on expert review of algorithmically proposed candidate matches. Moreover, most existing approaches focus almost exclusively on visual cues and overlook auxiliary information routinely available in field studies, such as image timestamps and camera-trap locations. We introduce Spotted, a location-informed, human-in-the-loop animal ReID framework that integrates visual similarity with spatio-temporal feasibility priors derived from camera locations, thereby reducing the amount of required expert review. Our method (i) computes an image-model-agnostic feasibility score based on the minimum travel speed required for two detections to correspond to the same individual, (ii) uses these feasibility cues as pseudo-supervision to train a lightweight head on top of a frozen visual foundation model, and (iii) fuses adapted visual similarity with spatio-temporal feasibility to obtain a robust pairwise matching score. We additionally integrate an active pair sampling strategy to accelerate annotation by initially prioritizing uncertain predictions. We evaluate Spotted on three challenging camera-trap ReID datasets comprised of spotted hyenas and leopards, which we release as part of this work. Our model improves average top-5 identification accuracy by 9pp, 2pp and 9pp over the best baseline on our LeopardID102, SpottedHyenaID109 and SpottedHyenaID415 datasets, respectively. Further, we show that our human-in-the-loop strategy reduces the number of queried comparisons by up to 69pp while achieving equivalent positive matches.

Democratising Camera Trap AI: An Open-Source Model for Detecting UK Mammals

Camera traps have become a cornerstone of biodiversity monitoring, but the artificial intelligence that turns vast quantities of images into usable ecological data is often locked behind commercial platforms or trained on fauna that does not match that of the British Isles. In an attempt to remove barriers and increase uptake, we release an open-source object detection model for 31 classes, 28 common UK mammal and bird species, plus utility classes for humans, calibration poles, and vehicles, drawn from a curated dataset of 48,165 labelled instances assembled from multiple sites over a decade of operational deployment through Conservation AI and its successor, Trap Tracker. The model, a YOLO26x detector trained and tested on an 80/10/10 class-stratified split, achieves a mean Average Precision of 0.984 at Intersection over Union (IoU) of 0.5 (0.956 at IoU 0.5-0.95) on the held-out validation set, with precision 0.988 and recall 0.965. On an unseen held-out test split, mean per-species confidence ranged from 0.96 to 0.99 across the 31 classes, with a 0.17% false-negative rate concentrated in difficult night-time, distant, or occluded images. These metrics are from data from the same pool of sites and cameras as training, so performance at entirely new sites is left to future work. We release the trained weights in ONNX format under a non-commercial licence, with local desktop and real-time camera support, aimed explicitly at ecologists with no machine-learning experience. This release is a deliberate counterweight to the multiple paid for models that have developed over the last decade.