Causal discovery is critical for understanding complex data-generating mechanisms, yet traditional algorithms often struggle with highly non-linear and noisy systems, or suffer from severe computational bottlenecks. Recent tabular foundation models based on Prior-Data Fitted Networks (PFNs) have demonstrated remarkable zero-shot inference capabilities, but their potential for explicit structural causal discovery remains underexplored. To bridge this gap, we propose DCD-PFN, a decoupling-aware foundation model for causal discovery. Instead of directly amortizing global graph reconstruction, DCD-PFN focuses on local causal discovery through a decoupling-based paradigm. Through pre-training on diverse synthetic Structural Causal Models (SCMs), the model learns sample-wise decoupling weights that enable Markov boundary (MB) identification. Furthermore, by leveraging parallelized local discovery, DCD-PFN efficiently reconstructs global causal graphs while remaining grounded in the theoretical foundations of decoupling-based causal discovery. Experiments demonstrate that our foundation model achieves robust zero-shot generalization.
Xiaoyu Lin, Nicholas Tagliapietra, Kehan Li +2cs.LG
Root-Cause Analysis (RCA) seeks to identify the variables responsible for abnormal system behavior in complex domains such as manufacturing, cloud computing, and healthcare. Existing approaches face a critical bottleneck: graph-based causal methods can identify intervention targets but typically require a known or accurately estimated causal graph, while graph-free statistical methods either localize marginal anomalies rather than structural causes, or rely on restrictive assumptions about graph structure or functional form. We propose StableRCA, a local mechanism-level RCA framework that avoids global graph discovery by estimating local Markov boundaries and detecting conditional distribution shifts within them. Leveraging the Independent Causal Mechanism principle, we show that intervention targets can be identified with probability converging exponentially in sample size under faithful Markov boundary recovery and non-degenerate mechanism shifts. Experiments on synthetic benchmarks and five real-world datasets demonstrate that StableRCA is robust to graph misspecification, effective under multiple intervention targets, scalable to large systems, and reliable across diverse application domains. Code is available at: https://anonymous.4open.science/r/StableRCA-E362