Region-Weighted Losses and Model Fusion for Cross-Modal PET Attenuation Correction

We describe our approach to the Big Cross-Modal Attenuation Correction (BIC-MAC) challenge, which asks for a pseudo-CT in Hounsfield Units to be synthesized from Non-Attenuation-Corrected PET (NAC-PET), DIXON MRI and a topogram, and scores both the pseudo-CT and the Attenuation-Corrected PET (AC-PET) reconstructed from it. Three ideas carried our improvements over the organizers' 3D U-Net baseline. The loss matters more than the architecture: we compute the $L_1$ error in the Carney attenuation-coefficient ($μ$) space that the CT metric itself uses, weighted by anatomical region. Only once that loss was in place did the unregistered DIXON MRI work as extra input channels. A fixed convex combination of two independently trained models then beat both of its members on three of the four metrics and ranks first overall on the public validation leaderboard.

Multimodal pseudo-CT synthesis for PET attenuation correction using separate modality encoding and topogram conditioning

We participated in the BIC-MAC Challenge with a multimodal 3D patch-based U-Net for pseudo-CT generation from NAC-PET, MRI, and 2D topograms. By using separate PET and MR encoders, multi-scale feature fusion, and FiLM-based topogram conditioning at the bottleneck, we obtain a model that integrates complementary cross-modal information while reducing reliance on precise voxel-wise correspondence between modalities. Our final submission can be found: https://github.com/rrr-uom-projects/BIC-MAC-MICCAI2026

Anatomical and Physical Supervision for CT-less PET Attenuation Correction: BIC-MAC 2026 Challenge

This report describes our submission to the Big Cross-Modal Attenuation Correction (BIC-MAC) 2026 Challenge for CT-less PET attenuation correction through multimodal pseudo-CT synthesis. We build upon a standard nnU-Net architecture and combine anatomical and physical supervision to improve both pseudo-CT quality and downstream PET reconstruction. Anatomical supervision is introduced through a frozen TotalSegmentator feature extractor, anatomy-guided structural constraints and patch sampling, while physical supervision is achieved using a differentiable attenuation correction factor projection loss based on multi-angle attenuation projections. Furthermore, the network is initialized with pretrained weights obtained from training on the SynthRAD Challenge MR-to-CT dataset. Minimal architectural modifications are applied, while performance improvements are pursued across the nnU-Net pipeline, including preprocessing, plans, and supervision design, among other components. Our final submission demonstrates the effectiveness of combining anatomical supervision, attenuation physics, and efficient nnU-Net scaling for CT-less PET attenuation correction.