Ontology alignment (OA) has evolved through several methodological paradigms, ranging from lexical and structural aligners to knowledge graph embedding (KGE) models and, more recently, Large Language Model (LLM)-based approaches. Although modern OA frameworks provide unified ecosystems for deploying these heterogeneous aligners, mechanisms for systematically reconciling their complementary and sometimes conflicting predictions remain relatively underexplored. We present OntoAligner-Ensemble, a modular and aligner-agnostic framework that combines candidate correspondences through a configurable two-stage process comprising voting-based fusion strategies followed by post-fusion selection policies. The framework supports any aligner implemented within OntoAligner that produces candidate correspondences, enabling diverse alignment paradigms to be integrated through a unified decision process. To demonstrate its effectiveness, we instantiate the framework using representative lightweight string-aligner, KGE-based, and Retrieval-Augmented Generation aligners powered by both open-weight and API-based LLMs. We evaluate individual aligners and ensemble configurations across eight benchmark tasks from five OAEI tracks spanning biomedical to beyond-equivalence. The results show that ensemble fusion consistently improves the balance between precision and recall and frequently outperforms standalone aligners across diverse domains. Furthermore, our analysis reveals that ensemble composition directly affects the precision-recall trade-off: heterogeneous cross-paradigm ensembles generally improve precision, whereas homogeneous LLM ensembles more often achieve higher overall F1-scores. These findings demonstrate that systematic ensemble learning offers a robust and reproducible strategy for OA while providing practical guidance for selecting ensemble compositions under different alignment scenarios.
Robert James Brock, Sebastian Maximilian Krupa, Jason Kahei Tamcs.CV cs.AI cs.LG
The FathomNetCLEF 2026 competition combines underwater object detection and fine-grained marine species classification under a positive-unlabeled evaluation setting. The provided training labels are sparse, while the hidden test set is out-of-distribution relative to the training imagery, creating both annotation incompleteness and source-shift challenges. We describe DS@GT ARC's multi-stage system developed for this setting while keeping model training restricted to the data provided by the competition. The final private-leaderboard model uses a frozen Megalodon YOLOv8x detector as a class-agnostic proposal generator, combines global and tiled inference with tile-edge filtering, classifies expanded proposal crops with a LoRA-finetuned DINOv3 ViT-H classifier, and ranks predictions using weighted geometric fusion of detector and classifier confidence. This system placed 12th out of 102 teams. A closely related variant added a locally trained TTN-inspired validity head as a light reranking signal, improving public-leaderboard and proxy-evaluation performance but slightly reducing private-leaderboard performance. Across experiments, the strongest lesson was that train-derived validation and detector-only metrics were not reliable enough for model selection. Instead, we used proxy datasets only for validation and comparison, and combined those signals with leaderboard feedback and targeted ablations. These experiments showed that reserving proposal recall, avoiding over-aggressive filtering, and improving downstream ranking were more effective than fine-tuning the detector or directly training on noisy pseudo-labels. Code: https://github.com/dsgt-arc/fathomnetclef-2026.
Credit-card fraud detection is difficult because fraudulent transactions are rare, costly, and unevenly distributed. Strong gradient-boosted tree models already perform well on structured transaction data, so the value of another fusion method is not obvious. This paper examines whether Combinatorial Fusion Analysis (CFA), which searches over model subsets and rank-score fusion rules, can still add value on the IEEE-CIS Fraud Detection benchmark. Using a leakage-free 60/20/20 train/validation/test protocol, we evaluate 480 fusion configurations built from seven base classifiers. The best test-set result comes from diversity-weighted score fusion of Random Forest, XGBoost, and LightGBM (DEF WtScore), with AUC-ROC = 0.9405, AUPRC = 0.6699, and F1 = 0.6373. Bootstrap confidence intervals from 1,000 resamples show that the gains over the strongest single model exclude zero for all three metrics. CFA matches soft voting on AUC-ROC, improves AUPRC and F1, and outperforms stacking in this setting. A CTGAN augmentation experiment gives a negative result: synthetic fraud samples degrade both individual models and CFA. Overall, CFA is most useful here not as a way to combine every classifier, but as a validation-stage method for choosing a small, complementary subset and assigning diversity-aware weights.