Autonomous discovery of new structure-plausibility laws for explainable and rapid crystal diagnosis and screening

Crystal generators and tool-using agents propose structures faster than density functional theory (DFT) energy and phonon calculations or experiments can assess them. Deciding which candidates merit expensive assessment is therefore the bottleneck, yet most screens test little beyond atomic overlap and give no chemical reason for failure. Here, our agents generate, test and actively refute two million candidate laws, leaving eight Plausibility Rules for Inorganic Structures (PRIS). These laws encode five mechanisms: short-range repulsion, ionic contact and packing, electrostatic balance, bond-valence conservation and crystallographic site complexity. Experimental structures satisfy our law sets at 82--99%, but satisfy Pauling's rules 2--5 together at only 6.5%. The strictest set detects 87.9% of damaged crystal structures, whereas distance cutoffs detect only 1.6--3.2%. PRIS plausibility is linearly correlated with synthesizability, so the PRIS-derived synthesis score (PSS) explainably screens 83.7% of hard-to-synthesize structures while retaining 80.7% of experimental structures. In a property-conditioned inverse-design run, PRIS and PSS can reduce the DFT validation queue by up to 67.3% and keep 99.2% of the candidates whose DFT-validated bulk moduli reach the design target. Beyond screening, PRIS explains why GNoME remains enriched in rare low-symmetry structures and reveals how wrong-element assignments in falsified crystal reports hide behind plausible coordinates. PRIS moves screening from a pass-or-fail verdict to a chemical reason for failure, showing that autonomous agents can discover, by active refutation, physicochemical laws that guide calculations and experiments.

Direct Optimization of a 3D Finite-Source Reflector via Neural-Network Parameterization

We present a direct optimization method for three-dimensional freeform reflectors that transform the light of a finite-étendue source into a prescribed far-field angular intensity distribution. The reflector profile is represented by a small neural network (a multilayer perceptron), which is trained end-to-end through a differentiable ray-tracing objective. We furthermore parameterize the emission directions in gnomonic coordinates, and show how we use this to ensure that every emitted ray intersects the reflector. At each iteration, the network is converted to a bicubic spline representation for ray-tracing efficiency, and intersections with this smooth surface are solved by a damped Newton solve, with gradients computed via the implicit function theorem. The traced output distribution is compared with the desired target on a 'soft' histogram, under an $H^{-1}$-type spectral weighting that emphasizes long-range transport of flux to improve convergence. Optimization is performed using a BFGS method with self-scaled Broyden updates and a plateau-perturbation rule to prevent stalling. The method converges reliably within seconds on a single GPU for all examples tested.

Conditional Flow Matching for ML-Based Inverse Design Problems

Engineering inverse design is often limited by the high computational cost of iterative solvers for optimization problems constrained by partial differential equations (PDEs) and by their sensitivity to initialization. Deep generative models can produce candidate designs without rerunning the simulator at inference time. Generative adversarial networks (GANs) sample in one forward pass, whereas diffusion models require iterative reverse-time integration. In this work, we add conditional flow matching (CFM) to EngiOpt and compare it with a conditional diffusion model and a conditional generative adversarial network (cGAN) on structural (beams2d) and thermal (heatconduction2d) benchmarks from EngiBench using the same downstream optimization protocol. We use cumulative optimality gap (COG) and final optimality gap (FOG) as the primary metrics for evaluating the generated designs as warm starts for gradient-based refinement. On the evaluated EngiOpt implementations and two EngiBench tasks, CFM achieves the lowest measured COG, FOG, maximum mean discrepancy (MMD), and volume-fraction deviation on both tasks. CFM has mean volume-fraction deviations of 0.4% and 1.0% on beams2d and heatconduction2d, respectively, compared with 3.8% and 11.2% for diffusion. At Euler s = 16, CFM achieves 53.2 samples/s on beams2d, about 66 times the measured throughput of the evaluated diffusion baseline using 1000 network evaluations under the same timing protocol, with COG 1.182 +/- 3.126, compared with 1.173 +/- 3.100 for Euler s = 32. Across the two tasks, CFM produces warm starts with lower measured COG than both baselines and uses fewer network evaluations than diffusion.

Diffusion-Based Inverse Design of Dielectric Resonator Metasurfaces for Shaping Smart Electromagnetic Environments

Future wireless systems are expected to transform the surrounding space from a passive propagation medium into a smart electromagnetic environment, where engineered surfaces control wave propagation, support wireless sensing, and create programmable electromagnetic fingerprints. A key challenge in realizing this vision is the inverse design of metasurfaces for tailored electromagnetic propagation. While forward analysis evaluates the response of a known geometry, the inverse task starts from a prescribed scattering signature and seeks a physically realizable structure that produces it. This inverse task is inherently nonlinear and often high-dimensional, while candidate solutions may be non-unique and provide no direct indication of practical realizability. Here, we introduce a conditional diffusion framework for inverse design of dielectric resonator metasurfaces from target angular scattering patterns. Trained on T-matrix simulated geometry-response pairs, the model learns a conditional distribution of geometries instead of a deterministic mapping, enabling multiple candidate designs for the ill-posed inverse problem. The best generated metasurface achieves a mean percentage error of 1.39%, outperforming CMA-ES optimization (4.1% after 10 h) while requiring only about one minute for after-training inference. The model also produces lower error distributions than deterministic neural baselines for out-of-distribution spectra, highlighting the potential of diffusion models for efficient metasurface design.

Anchored Scenario Coverage for Failure-Aware First-Hit Batch Inverse Design

Early discovery of at least one valid design satisfying a target requirement is a central objective in failure-prone closed-loop inverse design. A natural batch baseline ranks candidates by a product-form marginal valid-hit score, but selecting the highest-ranked candidates independently can produce redundant recommendations under predictive uncertainty and waste the experiment budget. We introduce ARC-SC(Anchored Risk-Constrained Scenario Coverage), a batch acquisition method that preserves strong marginal candidates as anchors and allocates the remaining batch positions by maximizing complementary coverage over predictive target scenarios under a risk-support constraint. In frozen-oracle closed-loop simulations on superconductivity and JARVIS materials-property benchmarks, ARC-SC yields a statistically supported improvement in first-hit discovery and remains competitive with directionally favorable first-hit performance on more challenging design space. These results establish ARC-SC as a POF-anchored, scenario-aware batch strategy for improving early valid-target discovery under structured experimental failure.

Towards a universal meta-optics solver via large language models

Metasurface design increasingly requires fast models that can operate across structurally distinct device families, rather than retraining a separate surrogate for every geometry class. Conventional neural network surrogates often depend on fixed-dimensional descriptors, family-specific output formats, and repeated architecture tuning, which limits their scalability across heterogeneous meta-atoms. Here, we present a unified large language model (LLM) workflow for multi-family metasurface modeling and inverse-design. Geometries, design parameters, and optical response channels were converted into a shared instruction-following text format and used to fine-tune Gemma-2-9B across 8 metasurface families. Compared with single-family baselines, the joint model simultaneously predicted the optical responses of all metasurface families while reducing the MSE for each family by an average of 56.5%. The same representation was also used for inverse design. These results show that a shared sequence-based LLM interface can provide a practical route to cross-family metasurface design while reducing the need for task-specific surrogate architectures.

Machine Learning Assisted Inverse Design of Pixelated mmWave Patch Antennas

A machine learning-assisted framework for the inverse design of pixelated millimetre-wave patch antennas targeting the 22--30 GHz band is presented. The antenna surface is represented as a 19x23 binary pixel grid on a Rogers RT/duroid 5880 substrate, where each pixel is either metal or empty, with a continuous electrical path from the feed enforced by design. An initial dataset of approximately 6,000 full-wave CST simulations was collected from structured random pixel patterns, of which only around 40% achieved a resonance with |S11| <= -10 dB anywhere in the band, resulting in an imbalanced dataset. To improve simulation efficiency, an XGBoost binary classifier was trained on this data to distinguish resonant from non-resonant patterns before simulation. Using the classifier as a pre-simulation filter, an additional 4,000 patterns were selected and simulated, raising the overall proportion of resonant designs in the combined 10,000-sample dataset from approximately 40% to 52%. A hybrid CNN-BiLSTM forward surrogate was then trained on this augmented dataset to predict the full complex S11 response across 801 frequency points, using a physics-guided composite loss that explicitly emphasises resonance dip accuracy. Finally, an inverse design model was developed that optimises in a compact 64-dimensional latent space using gradient descent to generate pixel patterns matching a desired S11 specification. The results show good agreement between the surrogate-predicted and CST-simulated |S11| responses for the generated designs and demonstrate the feasibility of automatically designing and reconfiguring antenna structures.

Closed-Loop Bayesian Molecular Inverse Design with Semantic LLM Surrogates

Practical molecular inverse design is rarely a one-shot generation problem; it often takes the form of closed-loop candidate-pool enrichment, where under a limited oracle budget the goal is to \emph{increase the fraction of generated molecules that match a desired property profile}. Bayesian optimization (BO) offers a natural framework for this setting, yet standard Gaussian-process surrogates typically operate in compressed continuous embeddings, which discard the substructural and reference-similarity signals that chemists naturally use to decide where to look next. We propose \textbf{\method}, a closed-loop framework in which the surrogate, rather than the generator, is treated as the locus of design choice, and instantiate it with a frozen large language model that reasons directly over the task instruction, SMILES-level optimization history, and oracle feedback in their native textual form. At each iteration, the surrogate returns a structured decision signal that selects informative reference molecules under an exploration and exploitation principle, optionally with a concise guidance sentence. This signal is converted into next-round conditioning text for a frozen molecular generator, yielding an inspectable optimization trace in natural language. Experiments on MolQA drug and material design tasks show that \method improves over one-shot prompting, is competitive with or stronger than GP-based BO baselines, and reveals a domain-dependent interface: reference-only transfer works best for binary drug targets, while adding a concise surrogate summary is more beneficial for continuous material

A Query-Time Framework for Transient 2D Pore-Scale Flow Prediction and Generative Design

Pore-scale flow governs transport and permeability behaviour in porous media engineering applications, yet repeated lattice Boltzmann method (LBM) simulation across many geometries and design queries remains costly for repeated deployment. This study formulates transient pore-scale flow prediction as a geometry-conditioned query-time operator and introduces QSGS-Transient-7606, a benchmark of 7,606 two-dimensional porous structures each paired with 30 logarithmically sampled LBM states. The proposed continuous-time pore-scale flow surrogate model (CT-PoreFlow) integrates topology-aware geometry encoding, compressed spectral mixing, and log-time conditioning with a late-time flux-calibration objective. On unseen test geometries, CT-PoreFlow achieves a velocity relative L2 of 0.2248 and a terminal permeability error of 12.81%. Frozen morphology and computed tomography image audits confirm reasonable cross-geometry robustness without fine-tuning. The surrogate is then embedded in an inverse design workflow, screening 9,216 generative adversarial network and diffusion candidates across 18 property targets prior to LBM verification. Guided GAN sampling attains 98.11% through-connectivity and 72.28% conditional design success, exceeding diffusion-based generation. The framework unifies transient flow prediction, transport-aware screening, and LBM-verified inverse design for porous media.

VortexChat: An agentic framework for autonomous multi-objective integrated photonic design

The advancement of modern integrated photonics is frequently bottlenecked by device design workflows that rely heavily on manual simulation and expert intuition. While inverse design offers an alternative, it remains constrained by expert supervision and a lack of end-to-end automation. To address these issues, we present VortexChat, an agentic framework for the autonomous, end-to-end inverse design of integrated photonic devices directly from natural language specifications. VortexChat couples a large language model (LLM) decision agent with topology generation, gradient-based refinement, and full-wave electromagnetic simulation. This closed-loop architecture enables the system to iteratively decompose design objectives, orchestrate computational tools, and update strategies based on feedback with minimal human intervention. Constrained by the absolute metrics of the Vortex100 Benchmark, VortexChat autonomously generates devices that strictly meet all predefined performance thresholds without any human-in-the-loop. As an experimental demonstration, we fabricated a broadband terahertz perfect vortex beam multiplexer, autonomously designed by VortexChat, with measurements confirming high-efficiency operation, high mode purity and low inter-channel crosstalk in agreement with full-wave simulations. These results demonstrate that an LLM agent can assume key aspects of expert decision-making in photonic inverse design while maintaining physical fidelity and fabrication feasibility, providing a scalable route towards autonomous design of complex integrated photonic systems.

Inductively Scalable, Single-Step Neural Surrogates for Wave-Scattering Inverse Problems

Neural network surrogates are an emerging alternative to traditional electromagnetic wave simulators like finite-difference time-domain (FDTD); their goal is to replace rigorous physical simulations with pre-trained neural networks that solve wave-scattering forward and inverse problems orders of magnitude faster. However, nonrecurrent, single-step surrogates have scaled only to a few tens of simulation variables. Here, we show that this barrier can be overcome by dynamically generating salient training examples during training, rather than randomly sampling the large space of possible examples. We introduce an algorithm that runs in parallel with surrogate training, using gradient ascent to search refractive-index and source configurations for cases where the surrogate disagrees with a full-wave ground-truth simulator. We also use source and ground-truth normalization with an evolving replay dataset to stabilize and accelerate learning. Using this approach, we train a fast, single-step surrogate for two-dimensional wave scattering with up to 41,772 controllable variables, including dense, freely configurable grids of refractive indices and complex-valued sources. The resulting neural surrogate is robustly accurate across diverse structured and unstructured examples and generalizes inductively to larger domains, reaching over 3 million controllable variables without retraining, a $73.8\times$ increase. We demonstrate the surrogate on large-scale forward simulations and inverse design of freeform beam splitters and gradient-index (GRIN) lenses up to 98 wavelengths wide, showing comparable or better performance than FDTD-based designs, with speedups from $1.29\times$ to $26.5\times$. These results demonstrate a practical path toward fast, robustly accurate, inductively scalable neural simulators for photonic inverse design and other wave-scattering inverse problems.

Two-Stage Deformable-Convolutional Inverse Design of Nanophotonic Absorbers from Optical Spectra

Data-driven inverse design enables efficient generation of nanophotonic structures with prescribed optical responses, but spectrum-to-geometry mapping remains challenging due to non-uniqueness and fine geometric features. This work presents a two-stage deformable-convolutional framework for reconstructing metal--insulator--metal resonator geometries from 80-dimensional absorption spectra. The spectrum is projected to a $150\times4\times4$ latent representation and decoded into a $64\times64$ resonator mask. Training combines supervised reconstruction with least-squares adversarial refinement initialized from the best supervised checkpoint. A three-run ablation compares deformable convolution with plain convolution, involution, Dynamic Conv, and ODConv under the same architecture. The proposed model achieves $20.79\pm0.31$~dB PSNR and $0.8501\pm0.0082$ SSIM, improving over plain convolution by 2.16~dB and 0.0831, respectively. It further achieves Dice $0.9623\pm0.0027$, IoU $0.9342\pm0.0038$, and boundary F-score $0.9550\pm0.0027$. Spectral consistency evaluated using a frozen forward surrogate yields RMSE $0.0805\pm0.0013$ and $R^2=0.7923\pm0.0065$. Learned offsets show stronger adaptive sampling at coarse and intermediate decoder stages. Overall, deformable sampling with supervised initialization and adversarial refinement improves spectrum-conditioned geometry reconstruction.

From fragmented data to actionable design: Physics-calibrated learning for plastic upcycling

Thermochemical upgrading of plastic waste is a key upcycling pathway, yet the experimental literature is fragmented by heterogeneous conditions and incomplete reporting. Complete-case learning would retain only 10.99% of the curated experiments, while target imputation can introduce biased supervision. Here we develop a Physics-Calibrated, Missingness-Gated, and Load-Balanced Mixture-of-Experts (PC-MG-MoE) framework that converts structured missingness into an informative learning signal. PC-MG-MoE learns directly from partially observed experiments without target imputation, reconstructs physically consistent product distributions, accommodates cross-laboratory heterogeneity, and provides interpretable model behaviour rather than black-box prediction alone. Under stringent source-grouped validation, it achieved the lowest aggregate absolute error among the evaluated models, supporting engineering screening under cross-laboratory heterogeneity. Wet-lab experiments provide an external comparison, showing key composition-dependent trends. Implemented as an interactive web-based workflow, PC-MG-MoE enables forward screening, physics-grounded constrained inverse design, targeted experimental planning that supports reduced experimental workload and trial-and-error, and laboratory-specific adaptation with new platform-specific data. This work establishes a transferable framework for converting fragmented literature data into experimentally actionable guidance for model-guided plastic upcycling and broader thermochemical systems.

PolymerGPT: Multi-property Optimization with a Decoder-Based GPT Model for Generative Polymer Design

Polymer property prediction and inverse generative design targeting desired properties are two crucial tasks in machine learning-assisted polymer design. While the former has received considerable attention, there have been limited methods developed for the latter. Existing methods focus on single-property optimization in the generative process, whereas accurate prediction of macroscopic material behavior requires simultaneous control of multiple physical properties. In this paper, we provide a transformative framework for direct optimization of a large collection of polymer properties. We propose PolymerGPT, a decoder-based GPT model that incorporates up to 37 commonly used polymer properties into the generative process via learned conditioning prefixes. It also supports a scaffold condition that specifies a desired scaffold for predicted structures. Our experimental results demonstrate that PolymerGPT achieves exceptional performance for unconditional and conditional generation while maintaining high validity, uniqueness, and novelty. Conditioning on five key properties yields generated structures whose predicted values closely match all target properties simultaneously.

Physics-Guided Generative AI for Property-Targeted 3D Porous Media Design

Inverse design of three-dimensional porous media is central to applications in filtration, catalysis, energy storage, fuel cells, thermal management, and biomedical scaffolds, but remains challenging because many distinct pore geometries can share similar porosity or permeability while small structural changes can strongly affect transport behaviour. This paper proposes a physics-guided generative AI framework for property-targeted porous media design, combining a property-aware variational autoencoder, a conditional latent diffusion model, and an independently trained differentiable structure-to-property surrogate. The framework learns a compact, physically informative latent design space, generates porous structures conditioned on target porosity and directional permeability, and refines generated samples using property-level feedback during denoising and decoding. Experiments on procedurally generated structures and real micro-CT porous-media datasets show improved target-property matching, directional permeability control, and property correlation compared with representative property-aware variational-autoencoder and latent-diffusion baselines. The results demonstrate a scalable route towards controllable inverse design of complex porous geometries and establish a foundation for simulation-informed generative AI tools in engineering and advanced materials discovery.

Catalyst Diffusion Transformer: Generative Inverse Design of Heterogeneous Catalysts

The vast chemical design space and complex, interdependent design variables make catalyst discovery for targeted properties highly labor- and resource-intensive. Although generative models have emerged as a promising solution, existing approaches are generally limited to single-property conditioning or narrow chemical spaces. Here, we present Catalyst Diffusion Transformer (CatDiT), a unified framework for inverse catalyst design that generates valid and novel structures ranging from intermetallic alloys to oxide surfaces. By learning compressed latent representations, CatDiT enables efficient training and rapid sampling while supporting simultaneous conditioning on adsorbate type, binding energy, and catalyst class. The model provides reliable control of discrete properties and directional control of continuous properties, enriching candidate pools for reaction-specific catalyst discovery. As a representative application, multi-conditional generation for the nitrogen reduction reaction (NRR) yields 28 density functional theory (DFT)-relaxed alloy candidates that satisfy the target activity window and lie above the pure-metal *N-*H scaling line, corresponding to a ~1.5-fold enrichment over the source distribution. These results establish CatDiT as a practical and scalable approach for property-directed catalyst inverse design and targeted catalyst generation.

When Every Simulation Counts: Value-Based Reinforcement Learning for Accelerated Photonics Inverse Design

Photonic-crystal surface-emitting lasers (PCSELs) can combine high-power operation with narrow-divergence surface emission, but optimizing coupled parameters requires costly full-wave simulations. Deep Q-network (DQN) optimization can reuse simulated transitions to guide edits, yet which value-learning mechanisms remain reliable under tight simulation budgets is unknown. We address this gap by comparing baseline DQN and six value-based variants for a seven-variable PCSEL design under a shared objective, simulator, 83-call budget, and four matched initializations. Beyond endpoints, we analyze sample efficiency, policy behavior, and physical response to separate learning gains from favorable starts or exploratory jumps. Dueling DQN is the only variant to improve all four seeds. Relative to the first evaluated designs, its selected structures increase the mean quality factor () from to (), reduce wavelength error by 64%, and increase upward power by 47%; compared with baseline DQN, they achieve a higher mean under the same budget. Other variants yield no consistent improvement; Double DQN reproduces baseline trajectories, while Rainbow-lite shows high upside but strong seed dependence. These results identify Dueling DQN as the most reliable configuration tested for simulation-budget-limited PCSEL inverse design and provide a reproducible framework for attributing algorithmic gains in scientific optimization. The source code is publicly available at https://github.com/Longying-Wen/PCSEL-RL.

ATLAS: A Foundation Neural Sampler for Amorphous Materials

Amorphous materials exhibit exceptional mechanical and functional properties, yet their rugged energy landscapes are notoriously difficult to sample. Below the glass-transition temperature, conventional molecular dynamics and Monte Carlo become inefficient because equilibration relies on rare barrier-crossing events, while data-driven generative models are constrained by scarce and biased reference ensembles. Here, we introduce ATLAS, an efficient sampler that learns a diffusion process to generate Boltzmann-distributed amorphous structures directly from a target energy function. Parameterized by an equivariant graph neural network, ATLAS generalizes across system size, temperature, and composition. By exploiting the time reversal of the diffusion process, it enables efficient estimation of thermodynamic quantities and steering toward target observables. In two-dimensional Kob-Andersen systems, ATLAS reproduces parallel tempering Markov chain Monte Carlo structural distributions, free energies and entropies, achieving below 0.2% free energy error in the low-temperature glass regime with over 500-fold fewer energy evaluations. In Cu-Zr and Cr-Co-Ni metallic glasses, ATLAS recovers experimentally observed short-range-order trends and steers structures toward prescribed order parameters and optimized bulk moduli. Moreover, composition-amortized pretraining outperforms composition-specific training from scratch, reduces inverse-design costs by several hundred-fold, and enables sampling with expensive universal machine learning interatomic potentials. Coupled to a large language model agent, ATLAS searches an eight-element space for high-entropy metallic glasses balancing stiffness and ductility, identifying a converged Pareto frontier within 480 oracle evaluations. Together, these results establish ATLAS as a foundation model for sampling, steering and designing amorphous materials.

Harnessing disorder to decouple extension and shear in kirigami metamaterials

Kirigami turns stiff sheets into compliant, shape-morphing structures, but its reliance on periodic cut patterns comes at a cost: correlated panel rotations couple extension to shear, so stretching one axis drives a parasitic shear that cannot be suppressed, and also confine anisotropic stiffness to a narrow, discrete set of responses that cannot be tuned independently. Biological tissues overcome an analogous constraint through controlled disorder, such as graded fiber orientations in skin and hierarchical anisotropy in myocardium, achieving direction-dependent mechanics unavailable to regular architectures. Here, we show that engineered disorder is a design degree of freedom for kirigami, with stochastic kirigami accessing a continuous and far broader region of mechanical response than periodic patterns. This includes programmable anisotropy with near-complete elimination of extension-shear coupling. Because disordered patterns lack a simple parameterization, we navigate this design space with a geometry-aware graph neural network (GNN) that maps cut topology to the full nonlinear, bidirectional stress-strain response, coupled to a genetic algorithm that inverse-designs patterns reproducing target responses along two perpendicular axes. The GNN trains an order of magnitude faster and more accurately than image-based models. Fabricated elastomer samples reproduce the predicted nonlinear, anisotropic responses, closing the loop from design to physical component. By turning disorder into a variable to control directional stiffness, this work develops architected materials that stretch without parasitic shear, from soft actuators to tissue-interfacing devices matched to the anisotropy of living tissue.

CatRetriever: Contrastive Representation Learning for Slab-to-Bulk Retrieval in Generative Catalyst Discovery

Inverse design is an emerging data-driven paradigm for efficiently navigating vast chemical spaces to discover new materials with targeted properties, and in the context of heterogeneous catalysis, surface generative models have recently advanced this goal by directly generating catalyst surface-adsorbate structures. However, these models typically operate at the slab level and do not provide the corresponding parent bulk structure, making it difficult to assess bulk-dependent properties such as formation energy, surface energy, crystallographic symmetry, and synthesizability. Here, we address this missing slab-to-bulk connection as a retrieval problem and introduce CatRetriever, a contrastive representation learning model that aligns slab and bulk crystal representations in a shared latent space. From a slab query, CatRetriever accurately retrieves plausible parent bulk candidates with R@1 > 91% and R@3 > 98% on both the in-distribution and holdout evaluation sets. We further extend the CatRetriever framework into an adsorption energy targeted bulk discovery pipeline that combines bulk retrieval, generative search space expansion, and adsorption energy distribution analysis. This workflow evaluates candidates by both structural compatibility with the query slab and their ability to access the target adsorption energy range across diverse surface environments. CatRetriever therefore provides a scalable route for connecting catalyst generative models with physically plausible and adsorption energy compatible bulk catalyst discovery.

Incremental Transformer for Surrogate-Based Inverse Design of Geopolymer Mixtures

Small-data inverse design is challenging in engineering informatics when observations are heterogeneous, mixed-type, and constrained by physical relations among design variables. This work proposes a topology-aware surrogate framework guided by an Incremental Transformer (INCRT) for physics-constrained inverse design, applied to geopolymer mixture design. The method integrates intrinsic-dimensionality analysis, mixed-variable design-space representation, tabular surrogate prediction, INCRT-based manifold rationalisation, and constrained inverse optimisation. Using a public benchmark of fly-ash and slag-based geopolymer concrete mixtures with compressive-strength and carbon-emission targets, the high-dimensional design space proves strongly redundant, organising around fewer effective mixture regimes. Compressive strength requires nonlinear tabular surrogates, while carbon emission is largely determined by composition and well recovered by regularised linear models. INCRT thus acts not as a replacement for tabular predictors but as a rationalisation layer providing prototype regimes and a manifold-support score for inverse design. Three strategies are compared: unconstrained surrogate optimisation, physics-constrained optimisation, and topology-aware physics-constrained optimisation. Unconstrained optimisation can match target strength but may yield physically invalid or off-manifold candidates; physics-only constraints do not always ensure data support. The topology-aware strategy yields candidates balancing target compliance, carbon reduction, physical admissibility, and proximity to the learned feasible manifold. The framework aims not to replace experimental validation but to support screening of credible candidate mixtures from small, mixed, physically constrained engineering datasets.

Large language model agents accelerate inverse design of metal-organic frameworks for gas separation

Metal-organic frameworks (MOFs) offer a highly modular platform for adsorptive gas separation, yet their vast reticular design space makes inverse design difficult under simultaneous constraints of chemical validity, separation performance, and structural diversity. Here, we present LEMO Agent, a large-language-model agent framework for closed-loop inverse design of gas-separation MOFs in MOFid space. LEMO Agent couples language-based candidate generation with MOFid standardization, explicit validity checking, Transformer-based property prediction, structured design memory, and multi-island exploration. Through iterative generate--validate--evaluate--remember cycles, the agent uses feedback from both successful and failed candidates to guide chemically constrained search across linker, metal, and topology choices. We evaluate LEMO Agent on CH$_4$/N$_2$ and CO$_2$/N$_2$ separation tasks. Compared with representative generative, optimization, and agentic baselines, LEMO Agent enriches high-performing candidates, improves predicted separation performance, and maintains broad chemical and topological diversity. Selected candidates are further reconstructed, evaluated by GCMC simulations, and passed through an experimental down-selection workflow based on chemical feasibility and ligand purchasability, leading to initial wet-lab synthesis and SEM characterization. These results demonstrate that large language model agents can serve as interpretable and scalable design engines for accelerating MOF discovery beyond conventional fixed-library screening.

Joint Discrete-Continuous Flow Matching for Open-Vocabulary Inverse Design of Multilayer Optical Coatings

Amortized neural inverse design typically remains closed-world: component choices are fixed vocabulary tokens, coordinate grids are frozen at training time, and continuous variables are discretized into sequence tokens. Multilayer optical coatings are an industrially important instance, coupling material sequence, layer thickness and wavelength-dependent response. We present IrisFlow, a query-based, open-vocabulary flow-matching framework instantiated in coatings: the target reflectance/transmittance spectrum, wavelength grid, candidate-material optical constants and layer count are supplied at query time. Candidate materials enter as wavelength-aware optical tokens rather than learned identities; material sequences are sampled by discrete flow matching over the query's candidate bank, thicknesses by continuous flow matching without discretization. A single 136M-parameter model designs 2-100-layer stacks. Across a 224-task benchmark it reconstructs in-distribution targets faithfully and retains same-order accuracy on a 15-material held-out bank without retraining; it reconstructs bands up to 1100 nm beyond its training envelope, designs against analytic application specifications and outperforms an autoregressive baseline on that baseline's material library. With optical constants calibrated to our deposition process, IrisFlow designs four color-displaying coolers, fabricated by ion-assisted evaporation: the three chromatic devices reach a CIEDE2000 color error of 3.1-5.2 while retaining 93-95% solar near-infrared reflectance, demonstrating open-vocabulary design carried through to fabricated coatings.

Neural Operator-enabled Topology-informed Evolutionary Strategy for PDE-Constrained Optimization

The inverse design of physical systems governed by partial differential equations is computationally demanding due to the high dimensionality and non-convexity of design spaces. Generative models for inverse design often lack robustness and transferability, whereas evolutionary strategies are robust but struggle in high-dimensional spaces. This paper introduces a Neural Operator-enabled Topology-informed Evolutionary Strategy (NOTES) that integrates dimensionality reduction, representation learning, and evolutionary optimization for efficient and transferable inverse design. NOTES couples a DeepONet-based neural operator with the Covariance Matrix Adaptation Evolution Strategy (CMA-ES) to perform global optimization in a compact latent space that encodes topology-aware priors while discovering high-performance designs for unseen operating conditions. Applied to nanophotonic beam-deflector inverse design governed by Maxwell's equations, NOTES reduces the design dimensionality from 256 to 25 and consistently achieves over 95 percent efficiency, outperforming CMA-ES, topology optimization, and other baselines. Applied to structural optimization, NOTES discovers designs that achieve compliance down to 246. By decoupling topology learning of a DeepONet from the governing physics in a PDE solver, NOTES provides a flexible and transferable framework for the inverse design of physical systems.

CertMix: Certified, Data-Efficient Metamaterial Design by Affine Mixing of Aligned Neural-Implicit Weight Spaces

Inverse design of mechanical metamaterials seeks a periodic unit cell whose homogenized elastic properties meet a prescribed target, but current learning-based methods are data-hungry, mostly interpolative, and provide no guarantee that the generated design satisfies the specification. We introduce CertMix, a data-efficient framework that represents each exemplar unit cell as a small periodic neural implicit field, specifically a SIREN signed-distance decoder overfit from a shared anchor, so that exemplar weight vectors become aligned and directly comparable. The key observation is that, in this aligned weight space, the homogenized elasticity tensor is approximately linear in the mixing coefficients. Targeted design therefore reduces to a small constrained affine-mixing problem solved with a differentiable periodic homogenizer in the loop. Negative coefficients enable extrapolation beyond the exemplar range, a linearity-mismatch trust region keeps blends valid, and split-conformal calibration converts the mismatch signal into a distribution-free certificate on achieved-property error. From as few as 50 exemplars, CertMix attains a scaled property error of $10^{-4}$, roughly two to three orders of magnitude below conditional generative baselines trained on 1000 cells. It remains accurate far outside the exemplar range, is $57\times$ faster than per-target topology optimization while avoiding checkerboards and enclosed voids, and extends to spatially graded fields, 3D triply periodic surfaces, and a certified running-shoe midsole application.

Data-Driven Forward and Inverse Modeling of V-Beam Thermal Sensors

This paper presents a machine learning framework for data-driven inverse design of V-beam thermal sensors. The goal is to determine the optimal sensor geometry: beam inclination angle, beam length and beam width that achieves a target displacement under a given temperature. The design should also provide the geometry with minimum structure volume and minimum mechanical stress the sensor must support. This problem is ill-posed as for a given displacement there are multiple possible geometric configurations, causing direct regression methods to fail. We document a series of five exploratory trials that progressively revealed the nature of the problem culminating in a two-phase solution: a neural network forward model trained to map geometry and material constants to sensor responses, a gradient-descent inverse optimization over the frozen forward model, minimizing stress and volume simultaneously. The proposed pipeline utilizes a 3000-sample dataset and achieves a MAPE of 4.76% for predicting the displacement, more than 70% of predictions having MAPE of under 5%.

SeqGPT: A Constrained Transformer Agent for the Inverse Design of Multi-Panel Composite Structures

Optimizing composite stacking sequences to match continuous targets (e.g., Lamination or Buckling Parameters) with discrete manufacturing constraints represents a challenging combinatorial inverse problem that regularly occurs in composite design especially when numerical optimization approaches are used (bi-step, bi-level configurations). In multipanel configurations, this complexity is further intensified by blending, a global compatibility/continuity requirement between the different panel stackings. This study presents SeqGPT, a conditional Transformer agent developed to replace computationally expensive iterative methods. To ensure both global continuity and manufacturing feasibility by construction, we implemented a hybrid neurosymbolic decoding strategy. SeqGPT predicts a conditional distribution that guides a Constrained Beam Search, where any branch violating blending rules is strictly pruned. Numerical experiments on the 18-panel horseshoe benchmark demonstrate that SeqGPT generates solutions near-instantaneously with buckling performance comparable to evolutionary methods, offering a significant speed-up compared to the state of the art.

Neural-Network Inverse Design of SRF Cavities and Transmons for Bosonic Quantum Computation

Three-dimensional superconducting radio-frequency (SRF) cavities provide exceptionally long-lived electromagnetic modes and, when coupled to nonlinear elements such as transmon qubits, become promising architectures for bosonic quantum information processing. The inverse design of such systems, i.e., recovering device geometries that produce specified electromagnetic and coupling targets, is generally a one-to-many problem. The qubit-cavity coupling strength depends sensitively on both the transmon geometry and its position within the cavity's electromagnetic field. As these systems scale up and their design parameter spaces grow, the cost of conventional iterative simulation becomes prohibitive. We present two deep neural network (DNN) approaches that address this inverse-design problem at complementary levels of the design stack. The first proposes SRF cavity geometries that produce target cavity observables. The second proposes transmon qubit designs that produce target qubit-cavity parameters - the coupling rate, qubit frequency, and anharmonicity $(g, ν_q, α)$. The recovered candidate designs match the targets to within ~5% (cavity) and ~2% (transmon), confirmed by end-to-end re-simulation. Both approaches map desired device behavior directly to candidate designs, a fast alternative to the iterative simulation studies usually required.

Mirror Illusion Art

Mirror Illusion Art is a novel reflection-conditioned 3D illusion where one object yields two target appearances (front and mirror). The task is formulated as inverse design from two target 2D images (front and mirror) to a printable 3D object with geometry and texture. Prior topology-driven and shadow-based approaches demand substantial manual effort, optimize shape only, and often yield non-smooth or incomplete geometry. To address these challenges, we propose AutoMIA, an automated Mirror Illusion Art design pipeline that jointly optimizes shape and color. To stabilize optimization and suppress artifacts, four mechanisms are introduced: (1) projection-alignment component (PAC) selection to reduce surface noise, (2) position-weighted adaptive (PWA) suppression for background noise, (3) internal voxel preservation (IVP) to prevent internal fractures, and (4) shape-color decoupled (SCD) optimization that balance shape and color optimization. AutoMIA generate diverse smooth Mirror Illusion artworks successfully both in the digital and physical world, with only around 76s design time and 2.6 GB memory on average using a single RTX 3090, advancing inverse graphics and computational design. Our code is available at https://github.com/zxp555/AutoMIA.

Interpretable Inverse Design of Metal-Organic Frameworks with Large Language Model Agents

Inverse design of metal-organic frameworks (MOFs) requires searching a combinatorially vast space where property labels are expensive and most machine-learning models reveal little about why a structure succeeds. We introduce LLM4MOF, a closed-loop framework in which language-model agents reason about chemistry, build candidate MOFs, and test them in simulation, refining hypotheses over ten autonomous iterations. One agent proposes interpretable design hypotheses over metal nodes, linkers, pore geometry, and functional chemistry, and a second translates them into constraints that select candidate MOFs, each made of a metal node, organic linker, and matching topology. Each hypothesis is tested through four diagnostic beams that apply different subsets of its constraints, so comparing them shows whether geometry, chemistry, or metal choice drives performance. Even when blind to the global property landscape of databases, LLM4MOF concentrates its search on top-performing structures across six adsorption, separation, and electronic-structure tasks within 400 property evaluations. The same loop also generates new MOFs de novo and validates them in live simulation, where it adapts the geometry to each requested condition, outperforming random search and a genetic algorithm at roughly $1 per campaign. LLM4MOF shows that language-model agents can run interpretable, simulation-grounded inverse design without training a model per objective.