Graph generation models have advanced significantly with deep learning, yet they remain limited in scalability, flexibility, and ability to model underlying structures. We present GraphK, a novel encoder-sampler-decoder framework for graph generation that overcomes these challenges through structural flexibility and computational efficiency. Unlike autoregressive approaches constrained by vocabulary size (i.e. number of nodes in graph generation), GraphK allows for both upscaling (generating graphs with more nodes than the input) and downscaling, providing a flexible control over output graph size. By learning permutation-invariant latent representations and sampling new node embeddings via maximum likelihood estimation, GraphK generalizes across graph sizes and structures. For edge generation, we employ edge prediction with a KDTree-based top-k neighbor search in the latent space, reducing computational cost. Based on the manifold smoothness assumption, our method effectively captures graph properties. Experiments on synthetic and real-world datasets show that GraphK outperforms existing methods, accurately learns graph structures, and generates synthetic graphs without explicit definitions.
Reconstructing a spatially and spectrally high-resolution hyperspectral image (HR-HSI) from a low-resolution HSI (LR-HSI) and a high-resolution RGB image (HR-RGB) usually assumes precise registration and a known camera response function (CRF). Both assumptions are difficult to satisfy with different sensors. We remove both through a permutation-invariant supervision principle: the Gram matrix of an unmixed abundance map depends on shared material composition but not on pixel ordering. Matching abundance Gram matrices therefore allows RGB-to-HSI mapping to be learned without spatial correspondence and without a predefined CRF. Under a full random permutation of HR-RGB pixels, a state-of-the-art fusion method collapses, whereas our reconstruction is unchanged after inverse reindexing for evaluation. Building on this principle, a residual spectral super-resolution function maps HR-RGB directly to HR-HSI without registration, known CRF, or paired supervision. Across indoor, natural-scene, and remote-sensing benchmarks, the method achieves accuracy comparable to approaches that require these assumptions while remaining robust when they are violated. Loss ablations further show that reconstruction accuracy is largely insensitive to the specific discrepancy used to match the Gram matrices, indicating that performance arises primarily from the permutation-invariant principle rather than loss tuning.
Aivin V. Solatorio, Olivier Dupriez, Rafael Macalabacs.CL cs.AI cs.IR cs.LG econ.GN
We study retrieval over catalogs of structured metadata, where each record is a small schema whose fields answer different kinds of query. Embedding a record with a text encoder first serializes its fields into a string, which forces a choice of field order. We show this choice, usually treated as an implementation detail, silently controls retrieval quality once the encoder is fine-tuned. A standard fine-tune loses 7.4 nDCG@10 points when the index is rebuilt under a different field order, because it reads absolute position instead of the field labels. We propose permutation-invariant fine-tuning ($\textbf{PI-FT}$), which serializes each record under a freshly sampled field order with random field dropout, so meaning binds to the labels rather than to position. The change is about two lines in the data loader; it costs negligible in-distribution accuracy and cuts the order-change penalty to 0.2 points. We study this in the discovery of development statistics, a catalog of nearly 10,000 indicators that should be searchable in many languages by a model small enough to self-host. As AI assistants and agents increasingly mediate access to public data and statistics, this retrieval step decides whether an answer is grounded in the right indicator or series, making discoverability a precondition for disseminating data through AI. Because usage logs cannot provide training signal for indicators no one has searched, we generate the queries instead. $\textbf{DevDataBench}$ is a fully LLM-generated benchmark of grounded, facet-targeted queries across 15 languages, covering every indicator for both training and evaluation. A fine-tuned 118M-parameter CPU encoder outperforms every zero-shot baseline, including $\texttt{text-embedding-3-large}$ (0.707 vs.\ 0.556 nDCG@10), with the largest gains in low-resource languages. We release the benchmark, pipeline, models, and a reusable PI-FT framework.
The theory of full conformal prediction uses deterministic non-conformity measure, but modern usage of full conformal prediction often relies on machine learning training, making stochasticity inevitable. A simple sufficient condition of almost sure permutation invariance of the non-conformity measure can be too restrictive, so many have suggested the relaxation to permutation in distribution as a condition for full conformal prediction validity. We, however, show that this commonly known condition is actually insufficient. We then provide a correct sufficient condition: Conditional Independence & Permutation Invariance in Distribution, which encompasses several stochastic settings that may be used in machine learning.
Large language models (LLMs) have shown impressive performance on diverse reasoning tasks, yet their capacity for structural reasoning in graphs remains unclear. We investigate whether LLMs can genuinely understand graph isomorphism -a fundamental problem in graph theory. While LLMs achieve near-perfect accuracy on isomorphism detection, we show this performance is illusory. When identical graphs are presented with permuted node labels, LLMs fail to identify their isomorphism. This finding suggests that LLMs exploit patterns rather than reasoning about abstract graph structure. Since permutation invariance is a fundamental requirement for valid structural reasoning, these results indicate that success on graph reasoning benchmarks should not be interpreted as evidence of genuine topological understanding.
Marin Biloš, James T. Wilson, Anderson Schneider +1cs.LG
Tabular foundation models with different architectures converge in accuracy across a range of classification and regression tasks. This raises questions a leaderboard cannot answer: (i) whether the models execute the same in-context algorithm, (ii) where row, column, and class-permutation invariances originate, and (iii) how robust they are under perturbations engineered against the inferred mechanism. We characterize all three. The model families realize qualitatively distinct similarity-based readouts: from an attention-weighted vote over context labels to a class-conditional mean readout, each confirmed by causal intervention. We find that the representation collapse highlighted in prior work is not a practical concern for them. Each model's permutation invariances trace to specific positional parameters whose removal preserves accuracy and makes approximate invariance exact. Perturbations engineered against each readout reproduce predicted failure modes; hub and rank attacks isolate them from refit baselines. Together these results give a mechanistic account of contemporary tabular foundation models and identify which inductive biases govern both their accuracy and characteristic failures.
Bayesian Optimization is an iterative method, tailored to optimizing expensive black box objective functions. Surrogate models like Gaussian Processes, which are the gold standard in Bayesian Optimization, can be inefficient for inputs with permutation symmetries, as the most common kernels employed are better suited for vector inputs rather than unordered sets of items. Motivated by this issue, we turn to permutation invariant Bayesian Optimization for well placement in Carbon Capture and Storage projects. The high fidelity black box simulator is instructed to operate wells under group control, giving rise to permutation symmetries within injector and producer groups that cannot be exploited with standard GP kernels. In this work, our main contribution is a novel Gaussian Process kernel (GP-Perm) that encodes permutation invariance by comparing sets through a stable divergence between their induced empirical representations, and can be combined with standard kernels for additional vector-valued inputs. As a learned invariant baseline, we also consider a Deep Kernel Learning model (DKL-DS) using the Deep Sets architecture to learn a permutation-invariant embedding. We evaluate the proposed methodology across 8 use cases, comprising seven synthetic benchmarks and one realistic CCS case study (Johansen formation)
Large language models (LLMs) are increasingly used for recommendation reranking, but their listwise predictions can depend on the order in which candidates are presented. This creates a mismatch between the set-based nature of recommendation and the sequence-based computation of decoder-only LLMs, where permuting an otherwise identical candidate set can change item scores and final rankings. Such order sensitivity makes LLM-based rerankers difficult to rely on, since rankings may reflect prompt serialization rather than user preference. We propose InvariRank, a permutation-invariant listwise reranking framework that addresses this dependence at the architectural level. InvariRank blocks cross-candidate attention with a structured attention mask and negates position-induced scoring changes through shared positional framing under Rotary Positional Embeddings (RoPE). Combined with a listwise learning-to-rank objective, the model scores all candidates in a single forward pass, avoiding permutation-based invariance training objectives that require multiple permutations of a candidate set. Experiments on recommendation benchmarks show that InvariRank maintains competitive ranking effectiveness while producing stable rankings across candidate permutations. The results suggest that architectural invariance is a practical route to reliable and efficient LLM-based recommendation reranking. The source code is at https://github.com/ejbito/InvariRank.