Calibrating Semantic Uncertainty from Observable Language-Model Probabilities

As generative artificial intelligence enters scientific and professional work, its uncertainty must be defined on the states that matter for inference and decision-making. Language models assign probabilities to words, whereas applications require uncertainty over meaningful states such as diagnoses, hypotheses or operational conditions. We introduce a \emph{semantic map}: a prespecified, testable bridge from probabilities over verbal responses to a posterior over declared finite states. The language distribution remains unrestricted; held-out calibration connects it to a reference posterior. We derive posterior-error bounds and conditions for existence, conditional uniqueness, presentation stability and stable inverse recovery. This distinction matters because language probabilities depend on prompt wording, while the target posterior should not change under information-equivalent rewording. Experiments use professional market text compiled from Federal Reserve economic and financial series, together with controlled simulations having exact posteriors. Across two fitted language models, language-derived probabilities outperform printed numerical confidence, recover held-out posteriors with valid uncertainty coverage, remain largely stable under paraphrase and respond appropriately to altered evidence. \textbf{Prompt engineering optimises a wording-dependent response; robust scientific use requires validated stability of application-relevant meaning.} The proposed map turns semantic uncertainty in generative systems into an identifiable and testable statistical measurement problem and, when its acceptance conditions hold, yields an auditable posterior estimate.

FUSE: FK-Steered Multi-Modal Flow Matching for Efficient Simulation-Based Posterior Estimation

Simulation-Based Inference (SBI) is critical for scientific discovery, with generative models offering a promising path toward efficient inference. However, existing methods struggle with effective multimodal modeling. They often rely on brute-force fusion strategies that ignore the structural disparities between parameters and observations, thus limiting estimation fidelity. In this work, we introduce FUSE (Feynman-Kac steered mUlti-modal flow matching for efficient Simulation-based posterior Estimation). Unlike prior work, FUSE employs a dual-track architecture that preserves the distinct features of multimodal inputs while facilitating dynamic interaction. Additionally, we propose an FK-steered sampling strategy that leverages intermediate observation likelihoods to guide the generative trajectories, effectively improving the sample quality during inference. Our approach outperforms state-of-the-art baselines on standard SBI benchmarks, producing posteriors that closely match ground-truth MCMC. Furthermore, in a real-world exoplanet orbital estimation task, FUSE successfully resolves complex parameter degeneracies that challenge existing methods, highlighting its potential to accelerate complex scientific discoveries in astrophysics and beyond.

Learning the Universe: Posterior Reliability of Neural Generative Models in High-Dimensional Field-Level Inference of Cosmic Initial Conditions

Accurate posterior estimation is central to scientific inference, as uncertainties determine what can be reliably learned from observational data. While Markov chain Monte Carlo methods provide asymptotic convergence guarantees, they are computationally demanding in high-dimensional settings. Neural network-based generative models for entire discretized 3D fields enable fast amortized inference but often lack convergence guarantees and principled accuracy assessment. Using Hamiltonian Monte Carlo to obtain reference posterior samples, we conduct a controlled field-level evaluation of an implicit generative model (Stochastic Interpolants) and an explicit likelihood-based model (GLOW normalizing flows). This comparison, unavailable in typical applications, enables the detection of posterior geometry failures that standard metrics cannot capture. As a case study, we consider the cosmological inverse problem of inferring cosmic initial conditions from present-day large-scale structure. To match the precision of modern cosmological data, this problem increasingly relies on complex, non-linear, and non-differentiable simulators, which are incompatible with gradient-based inference frameworks. Generative models offer a route to address these challenges, provided their inferred posteriors are reliable. In this work, we show that matching posterior means, marginal distributions, or achieving high cross-correlation does not imply correct uncertainty structure, as revealed by posterior variance fields and sample-based evaluations. Through this work, we aim to raise awareness of the challenges of uncertainty estimation in high-dimensional field-level settings, highlighting the importance of careful design and validation of neural generative approaches for scientific applications.